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    C2 domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834505, updated on 18-Sep-2024

    Summary

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    Official Full Name
    C2 domain-containing protein
    Primary source
    TAIR:AT5G44760
    Locus tag
    AT5G44760
    See related
    Araport:AT5G44760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K23L20.10; K23L20_10
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (18060586..18062764)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Y-family DNA polymerase H Neighboring gene DNA-directed DNA polymerase Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene high molecular weight subunit-like glutenin Neighboring gene organellar single-stranded DNA binding protein 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    C2 domain-containing protein
    NP_199289.1
    • C2 domain-containing protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein (TAIR:AT4G20080.1); Has 678 Blast hits to 384 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 676; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      18060586..18062764
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123843.1 → NP_199289.1  C2 domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199289.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178URH2, Q9FIZ1
      Conserved Domains (2) summary
      cd08378
      Location:39 → 155
      C2B_MCTP_PRT_plant; C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset
      cl14603
      Location:192 → 316
      C2; C2 domain
    Nucleotide Protein
    Heading Accession and Version

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