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    BNR/Asp-box repeat family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835877, updated on 18-Sep-2024

    Summary

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    Official Full Name
    BNR/Asp-box repeat family protein
    Primary source
    TAIR:AT5G57700
    Locus tag
    AT5G57700
    See related
    Araport:AT5G57700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MRI1.6; MRI1_6
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    8
    Sequence:
    Chromosome: 5; NC_003076.8 (23374873..23377229)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene diacylglycerol kinase 4 Neighboring gene Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein Neighboring gene AP2/B3-like transcriptional factor family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001085294.2
    NM_001161312.1
    NM_001345270.1
    NM_125153.4
    NM_180873.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    BNR/Asp-box repeat family protein
    NP_001078763.1
    • BNR/Asp-box repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Neuraminidase (InterPro:IPR011040), BNR repeat (InterPro:IPR002860); Has 760 Blast hits to 752 proteins in 299 species: Archae - 6; Bacteria - 613; Metazoa - 0; Fungi - 22; Plants - 42; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).
    NP_001154784.1
    • BNR/Asp-box repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Neuraminidase (InterPro:IPR011040), BNR repeat (InterPro:IPR002860); Has 762 Blast hits to 754 proteins in 300 species: Archae - 6; Bacteria - 615; Metazoa - 0; Fungi - 22; Plants - 42; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).
    NP_568864.2
    • BNR/Asp-box repeat family protein; CONTAINS InterPro DOMAIN/s: Neuraminidase (InterPro:IPR011040), BNR repeat (InterPro:IPR002860); Has 759 Blast hits to 751 proteins in 298 species: Archae - 6; Bacteria - 612; Metazoa - 0; Fungi - 22; Plants - 42; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).
    NP_851204.1
    • BNR/Asp-box repeat family protein; CONTAINS InterPro DOMAIN/s: Neuraminidase (InterPro:IPR011040), BNR repeat (InterPro:IPR002860); Has 764 Blast hits to 756 proteins in 302 species: Archae - 6; Bacteria - 617; Metazoa - 0; Fungi - 22; Plants - 42; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      23374873..23377229
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001085294.2 → NP_001078763.1  BNR/Asp-box repeat family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078763.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJ69, F4KC30, Q8LFU2
      Conserved Domains (2) summary
      cd15482
      Location:23 → 327
      Sialidase_non-viral; Non-viral sialidases
      pfam13088
      Location:47 → 313
      BNR_2; BNR repeat-like domain

    2. NM_125153.4 → NP_568864.2  BNR/Asp-box repeat family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568864.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJ69, A0A5S9YFF7, A2RVV4, Q8LFU2
      Conserved Domains (1) summary
      pfam13088
      Location:36 → 302
      BNR_2; BNR repeat-like domain

    3. NM_180873.2 → NP_851204.1  BNR/Asp-box repeat family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851204.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJ69, A1A6F3, Q8LFU2
      Conserved Domains (2) summary
      cd15482
      Location:17 → 321
      Sialidase_non-viral; Non-viral sialidases
      pfam13088
      Location:41 → 307
      BNR_2; BNR repeat-like domain

    4. NM_001345270.1 → NP_001331348.1  BNR/Asp-box repeat family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJ69, A0A5S9YFF7, A2RVV4, Q8LFU2
      Conserved Domains (1) summary
      pfam13088
      Location:36 → 302
      BNR_2; BNR repeat-like domain

    5. NM_001161312.1 → NP_001154784.1  BNR/Asp-box repeat family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154784.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJ69, F4KC29, Q8LFU2
      Conserved Domains (2) summary
      cd15482
      Location:13 → 317
      Sialidase_non-viral; Non-viral sialidases
      pfam13088
      Location:37 → 303
      BNR_2; BNR repeat-like domain
    Nucleotide Protein
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