FPF1 flowering promoting factor 1 [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: FPF1
Official Full Name: flowering promoting factor 1
Primary source: TAIR:AT5G24860
Locus tag: AT5G24860
See related: Araport:AT5G24860
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: ARABIDOPSIS FLOWERING PROMOTING FACTOR 1; ATFPF1; F6A4.70; F6A4_70; FLOWERING PROMOTING FACTOR 1
Summary: encodes a small protein of 12.6 kDa that regulates flowering and is involved in gibberellin signalling pathway. It is expressed in apical meristems immediately after the photoperiodic induction of flowering. Genetic interactions with flowering time and floral organ identity genes suggest that this gene may be involved in modulating the competence to flower. There are two other genes similar to FPF1, FLP1 (At4g31380) and FLP2 (no locus name yet, on BAC F8F16 on chr 4). This is so far a plant-specific gene and is only found in long-day mustard, arabidopsis, and rice.
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Genomic context

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See FPF1 in Genome Data Viewer

Location:: chromosome: 5

Exon count:: 1

Sequence:: Chromosome: 5; NC_003076.8 (8541558..8542473)

Chromosome 5 - NC_003076.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

We propose that GhFPF1 may be involved in flowering time control and shade-avoidance responses.
Title: Upland cotton gene GhFPF1 confers promotion of flowering time and shade-avoidance responses in Arabidopsis thaliana.

Submit: New GeneRIF Correction

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_122395.5

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
acts_upstream_of_or_within positive regulation of flower development	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in regulation of flower development	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within response to gibberellin	IGI Inferred from Genetic Interaction more info	PubMed
involved_in vegetative to reproductive phase transition of meristem	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in mitochondrion	ISM Inferred from Sequence Model more info
located_in nucleus	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: flowering promoting factor 1

NP_197868.1

FLOWERING PROMOTING FACTOR 1 (FPF1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus, positive regulation of flower development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10625.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003076.8 Reference assembly

Range

8541558..8542473

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001343900.1 → NP_001330701.1 flowering promoting factor 1 [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8BBM5
NM_001343901.1 → NP_001330702.1 flowering promoting factor 1 [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8BBN7
NM_122395.5 → NP_197868.1 flowering promoting factor 1 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_197868.1

Status: REVIEWED

UniProtKB/Swiss-Prot

O23624

UniProtKB/TrEMBL

A0A178UKX8, A0A5S9Y7J4