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    Ribosomal protein S19 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830808, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ribosomal protein S19 family protein
    Primary source
    TAIR:AT5G09490
    Locus tag
    AT5G09490
    See related
    Araport:AT5G09490
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T5E8.290; T5E8_290
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (2952216..2953245, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene dicarboxylate carrier 3 Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene Ribosomal protein S19 family protein Neighboring gene Ribosomal protein S19 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. Carroll AJ, et al. Mol Cell Proteomics, 2008 Feb. PMID 17934214
    2. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_120986.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    part_of cytosolic small ribosomal subunit HDA PubMed 

    General protein information

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    Preferred Names
    Ribosomal protein S19 family protein
    NP_196511.1
    • Ribosomal protein S19 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15, eukaryotic/archaeal (InterPro:IPR005713), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19 family protein (TAIR:AT5G09500.1); Has 9411 Blast hits to 9411 proteins in 3582 species: Archae - 256; Bacteria - 4896; Metazoa - 280; Fungi - 237; Plants - 1722; Viruses - 0; Other Eukaryotes - 2020 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2952216..2953245 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120986.3 → NP_196511.1  Ribosomal protein S19 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196511.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FY66
      UniProtKB/TrEMBL
      A0A178UDT3, A0A384L6V7, A0MFF1, Q1PDY1
      Conserved Domains (1) summary
      PTZ00096
      Location:10 → 150
      PTZ00096; 40S ribosomal protein S15; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FY66.1

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