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    PUX5 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827210, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PUX5
    Official Full Name
    serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma
    Primary source
    TAIR:AT4G15410
    Locus tag
    AT4G15410
    See related
    Araport:AT4G15410
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DL3750W; FCAALL.290; serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma
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    Genomic context

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    See PUX5 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (8814736..8816815)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene HXXXD-type acyl-transferase family protein Neighboring gene Protein phosphatase 2A regulatory B subunit family protein Neighboring gene RNAse II-like 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Protein domain-domain interactions and requirements for the negative regulation of Arabidopsis CDC48/p97 by the plant ubiquitin regulatory X (UBX) domain-containing protein, PUX1. Park S, et al. J Biol Chem, 2007 Feb 23. PMID 17190830
    2. The Arabidopsis metacaspase9 degradome. Tsiatsiani L, et al. Plant Cell, 2013 Aug. PMID 23964026, Free PMC Article
    3. Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. Van Leene J, et al. Nat Plants, 2019 Mar. PMID 30833711
    4. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157
    5. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_117629.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATPase binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma
    NP_567463.1
    • serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma (PUX5); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), SEP domain (InterPro:IPR012989), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: plant UBX domain containing protein 4 (TAIR:AT4G04210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      8814736..8816815
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117629.4 → NP_567463.1  serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567463.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7Y175, Q94A11
      UniProtKB/TrEMBL
      A0A178UUE8, A0A5S9XTC0, A0A654FPX8, A0A7G2EXK7
      Conserved Domains (3) summary
      smart00553
      Location:231 → 311
      SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
      cd14349
      Location:6 → 44
      UBA_CF106; UBA-like domain found in uncharacterized protein C6orf106 and similar proteins
      cd01770
      Location:349 → 420
      UBX_UBXN2; Ubiquitin regulatory domain X (UBX) found in UBX domain-containing proteins UBXN2A, UBXN2B, NSFL1C/UBXN2C, and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7Y175.1

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