U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Survival protein SurE-like phosphatase/nucleotidase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827151, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    Survival protein SurE-like phosphatase/nucleotidase
    Primary source
    TAIR:AT4G14930
    Locus tag
    AT4G14930
    See related
    Araport:AT4G14930
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DL3505W; FCAALL.200
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 4
    Exon count:
    8
    Sequence:
    Chromosome: 4; NC_003075.7 (8538586..8541899)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene HISTIDINE BIOSYNTHESIS 5B Neighboring gene Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein Neighboring gene ncRNA Neighboring gene amine oxidase 1 Neighboring gene SNARE associated Golgi protein family Neighboring gene Tubulin/FtsZ family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    2. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    NM_117579.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables nucleotidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Survival protein SurE-like phosphatase/nucleotidase
    NP_567449.1
    • Survival protein SurE-like phosphatase/nucleotidase; FUNCTIONS IN: hydrolase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Survival protein SurE-like phosphatase/nucleotidase (InterPro:IPR002828); BEST Arabidopsis thaliana protein match is: Survival protein SurE-like phosphatase/nucleotidase (TAIR:AT1G72880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      8538586..8541899
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001340978.1 → NP_001328377.1  Survival protein SurE-like phosphatase/nucleotidase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZF8, A0A1P8B4G8, A0A654FPG1

    2. NM_117579.3 → NP_567449.1  Survival protein SurE-like phosphatase/nucleotidase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567449.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZF8, A0A5S9XSF7, A0A654FPG1, Q8LAM2
      Conserved Domains (1) summary
      pfam01975
      Location:16 → 209
      SurE; Survival protein SurE
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.