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    SUFE2 sulfur E2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843107, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SUFE2
    Official Full Name
    sulfur E2
    Primary source
    TAIR:AT1G67810
    Locus tag
    AT1G67810
    See related
    Araport:AT1G67810
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12A21.6; F12A21_6; sulfur E2
    Summary
    Encodes a protein capable of stimulating the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. SufE2:GFP localizes to the chloroplasts where it is likely to play a role in iron-sulfur cluster assembly. Transcript levels for this gene are high in the pollen relative to other organs based on RT-PCR analysis.
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    Genomic context

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    See SUFE2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (25426234..25427461)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Copine (Calcium-dependent phospholipid-binding protein) family Neighboring gene miscRNA Neighboring gene Protein phosphatase 2C family protein Neighboring gene alpha-fucosidase 1 Neighboring gene chloroplast sensor kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of Arabidopsis thaliana SufE2 and SufE3: functions in chloroplast iron-sulfur cluster assembly and Nad synthesis. M NMU, et al. J Biol Chem, 2007 Jun 22. PMID 17452319
    2. A subcellular localization compendium of hydrogen peroxide-induced proteins. Inzé A, et al. Plant Cell Environ, 2012 Feb. PMID 21443605
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_105449.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables enzyme activator activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within iron-sulfur cluster assembly IC
    Inferred by Curator
    more info
    		 PubMed 
    acts_upstream_of_or_within positive regulation of sulfur metabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    sulfur E2
    NP_176947.1
    • sulfur E2 (SUFE2); CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808); BEST Arabidopsis thaliana protein match is: quinolinate synthase (TAIR:AT5G50210.1); Has 2361 Blast hits to 2361 proteins in 734 species: Archae - 2; Bacteria - 1651; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 622 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25426234..25427461
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105449.4 → NP_176947.1  sulfur E2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176947.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FXE3
      UniProtKB/TrEMBL
      A0A5S9WSI1
      Conserved Domains (1) summary
      pfam02657
      Location:87 → 204
      SufE; Fe-S metabolizm associated domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FXE3.1

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