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    ARD3 acireductone dioxygenase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817180, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ARD3
    Official Full Name
    acireductone dioxygenase 3
    Primary source
    TAIR:AT2G26400
    Locus tag
    AT2G26400
    See related
    Araport:AT2G26400
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ACIREDUCTONE DIOXYGENASE; acireductone dioxygenase 3; ARD; ATARD3; T9J22.7; T9J22_7
    Summary
    Encodes a protein predicted to belong to the acireductone dioxygenase (ARD/ARD#Aeo)family.
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    Genomic context

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    See ARD3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (11231770..11233388, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene Serine protease inhibitor (SERPIN) family protein Neighboring gene IQ-domain 4 Neighboring gene 1-phosphatidylinositol-4-phosphate 5-kinase 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene expression programs during shoot, root, and callus development in Arabidopsis tissue culture. Che P, et al. Plant Physiol, 2006 Jun. PMID 16648215, Free PMC Article
    2. The role of methionine recycling for ethylene synthesis in Arabidopsis. Bürstenbinder K, et al. Plant J, 2007 Jan. PMID 17144895
    3. Identification of ubiquitinated proteins in Arabidopsis. Manzano C, et al. Plant Mol Biol, 2008 Sep. PMID 18535787
    4. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article
    5. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001336065.1
    NM_128197.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables acireductone dioxygenase [iron(II)-requiring] activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables acireductone dioxygenase [iron(II)-requiring] activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables heteropolysaccharide binding NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-methionine salvage from methylthioadenosine IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    acireductone dioxygenase 3
    NP_180208.1
    • acireductone dioxygenase 3 (ARD3); FUNCTIONS IN: heteroglycan binding, acireductone dioxygenase [iron(II)-requiring] activity, metal ion binding; INVOLVED IN: oxidation reduction, L-methionine salvage from methylthioadenosine; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acireductone dioxygenase, ARD (InterPro:IPR004313), Cupin, RmlC-type (InterPro:IPR011051), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT4G14710.2); Has 1538 Blast hits to 1531 proteins in 517 species: Archae - 0; Bacteria - 695; Metazoa - 158; Fungi - 135; Plants - 466; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      11231770..11233388 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336063.1 → NP_001324275.1  acireductone dioxygenase 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZM1

    2. NM_001336064.1 → NP_001324274.1  acireductone dioxygenase 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VPM9, A0A1P8AZL9, A0A5S9X1L1

    3. NM_128197.4 → NP_180208.1  acireductone dioxygenase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180208.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O48707
      UniProtKB/TrEMBL
      A0A178VPM9, A0A5S9X1L1
      Conserved Domains (1) summary
      pfam03079
      Location:14 → 168
      ARD; ARD/ARD' family

    4. NM_001336065.1 → NP_001324276.1  acireductone dioxygenase 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VPM9, A0A1P8AZL0, A0A5S9X1L1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O48707.1

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