Jrkl JRK-like [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Jrklprovided by RGD
Official Full Name: JRK-likeprovided by RGD
Primary source: RGD:1308986
See related: EnsemblRapid:ENSRNOG00000047133 AllianceGenome:RGD:1308986
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: RGD1308986
Summary: Predicted to enable DNA binding activity. Predicted to be active in nucleus. Orthologous to human JRKL (JRK like). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: 8q11

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	8	NC_086026.1 (18505808..18508704, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	8	NC_051343.1 (10224172..10227068, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	8	NC_005107.4 (11884903..11887799, complement)

Chromosome 8 - NC_086026.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables DNA binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: jerky protein homolog-like

Names: jerky homolog-like; jerky-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001108122.1 → NP_001101592.1 jerky protein homolog-like

See identical proteins and their annotated locations for NP_001101592.1

Status: PROVISIONAL

Source sequence(s)

CH473993

UniProtKB/TrEMBL

A6JN68, M0R5M5

Related

ENSRNOP00000064696.1, ENSRNOT00000072420.4

Conserved Domains (3) summary

smart00674
Location:73 → 139

CENPB; Putative DNA-binding domain in centromere protein B, mouse jerky and transposases

pfam03184
Location:206 → 385

DDE_1; DDE superfamily endonuclease

cl21459
Location:4 → 52

HTH; Helix-turn-helix domains