U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    cytomegalovirus UL139 protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818022, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    cytomegalovirus UL139 protein
    Primary source
    TAIR:AT2G34580
    Locus tag
    AT2G34580
    See related
    Araport:AT2G34580
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T31E10.8; T31E10_8
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 2
    Exon count:
    5
    Sequence:
    Chromosome: 2; NC_003071.7 (14565660..14567673, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene gibberellin 2-oxidase 3 Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene PIN domain-like family protein Neighboring gene uncharacterized protein Neighboring gene Transketolase family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_001124970.1
    NM_129011.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    cytomegalovirus UL139 protein
    NP_001118442.1
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Herpesvirus UL139, cytomegalovirus (InterPro:IPR021042); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_565792.2
    • CONTAINS InterPro DOMAIN/s: Herpesvirus UL139, cytomegalovirus (InterPro:IPR021042); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14565660..14567673 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129011.2 → NP_565792.2  cytomegalovirus UL139 protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565792.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VXD6, F4IHX8
      Conserved Domains (1) summary
      pfam12507
      Location:22 → 142
      HCMV_UL139; Human Cytomegalovirus UL139 protein

    2. NM_001124970.1 → NP_001118442.1  cytomegalovirus UL139 protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118442.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VXD6, F4IHX8
      Conserved Domains (1) summary
      pfam12507
      Location:22 → 142
      HCMV_UL139; Human Cytomegalovirus UL139 protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools