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    EULS3 hydroxyproline-rich glycoprotein family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818491, updated on 18-Sep-2024

    Summary

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    Official Symbol
    EULS3
    Official Full Name
    hydroxyproline-rich glycoprotein family protein
    Primary source
    TAIR:AT2G39050
    Locus tag
    AT2G39050
    See related
    Araport:AT2G39050
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ArathEULS3; Euonymus lectin S3; T7F6.22; T7F6_22
    Summary
    Encodes a nucleocytoplasmic lectin that is capable of binding carbohydrates.
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    Genomic context

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    See EULS3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (16303295..16305633)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Acyl-CoA N-acyltransferases (NAT) superfamily protein Neighboring gene Peroxidase superfamily protein Neighboring gene ncRNA Neighboring gene Nodulin MtN3 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The ArathEULS3 Lectin Ends up in Stress Granules and Can Follow an Unconventional Route for Secretion. Dubiel M, et al. Int J Mol Sci, 2020 Feb 28. PMID 32121292, Free PMC Article
    2. Lectin activity of the nucleocytoplasmic EUL protein from Arabidopsis thaliana. Van Hove J, et al. Biochem Biophys Res Commun, 2011 Oct 14. PMID 21945438, Free PMC Article
    3. The Arabidopsis lectin EULS3 is involved in stomatal closure. Van Hove J, et al. Plant Sci, 2015 Sep. PMID 26259197
    4. Screening for in planta protein-protein interactions combining bimolecular fluorescence complementation with flow cytometry. Berendzen KW, et al. Plant Methods, 2012 Jul 12. PMID 22789293, Free PMC Article
    5. An abscisic acid-responsive protein interaction network for sucrose non-fermenting related kinase1 in abiotic stress response. Carianopol CS, et al. Commun Biol, 2020 Mar 26. PMID 32218501, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The ArathEULS3 Lectin Ends up in Stress Granules and Can Follow an Unconventional Route for Secretion.
      Title: The ArathEULS3 Lectin Ends up in Stress Granules and Can Follow an Unconventional Route for Secretion.
    2. Data point towards the physiological importance of ArathEULS3 for stomatal movement.[EULS3]
      Title: The Arabidopsis lectin EULS3 is involved in stomatal closure.
    3. these results show for the first time that ArathEULS3 and its EUL domain possess carbohydratebinding activity and hence can be considered as lectin
      Title: Lectin activity of the nucleocytoplasmic EUL protein from Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_129462.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables carbohydrate binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within defense response to bacterium IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within stomatal closure IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hydroxyproline-rich glycoprotein family protein
    NP_565899.1
    • hydroxyproline-rich glycoprotein family protein; CONTAINS InterPro DOMAIN/s: Ricin B-related lectin (InterPro:IPR008997), Ricin B lectin (InterPro:IPR000772); Has 1708 Blast hits to 1449 proteins in 222 species: Archae - 0; Bacteria - 47; Metazoa - 514; Fungi - 386; Plants - 615; Viruses - 5; Other Eukaryotes - 141 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      16303295..16305633
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129462.3 → NP_565899.1  hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565899.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q945P1, Q9ZV03
      UniProtKB/TrEMBL
      A0A5S9X5B3, A0A654F070
      Conserved Domains (2) summary
      PRK14086
      Location:14 → 113
      dnaA; chromosomal replication initiator protein DnaA
      pfam14200
      Location:199 → 302
      RicinB_lectin_2; Ricin-type beta-trefoil lectin domain-like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q945P1.1

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