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    S-locus lectin protein kinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842444, updated on 18-Sep-2024

    Summary

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    Official Full Name
    S-locus lectin protein kinase family protein
    Primary source
    TAIR:AT1G61500
    Locus tag
    AT1G61500
    See related
    Araport:AT1G61500
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T25B24.15; T25B24_15
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (22689623..22693799, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene S-locus lectin protein kinase family protein Neighboring gene S-locus lectin protein kinase family protein Neighboring gene pseudo Neighboring gene PSI type III chlorophyll a/b-binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_104831.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calmodulin binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in recognition of pollen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    S-locus lectin protein kinase family protein
    NP_564777.1
    • S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Protein kinase, ATP binding site (InterPro:IPR017441), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61490.1); Has 123382 Blast hits to 121623 proteins in 4622 species: Archae - 108; Bacteria - 13648; Metazoa - 45596; Fungi - 10441; Plants - 35145; Viruses - 425; Other Eukaryotes - 18019 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      22689623..22693799 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001333981.1 → NP_001322479.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AU51, A0A654EVT2

    2. NM_001333982.1 → NP_001322478.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AU37, A0A654EVT2

    3. NM_104831.3 → NP_564777.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564777.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SYA0
      UniProtKB/TrEMBL
      A0A654EVT2
      Conserved Domains (7) summary
      smart00108
      Location:31 → 147
      B_lectin; Bulb-type mannose-specific lectin
      smart00221
      Location:492 → 762
      STYKc; Protein kinase; unclassified specificity
      cd00028
      Location:32 → 147
      B_lectin; Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically ...
      pfam11883
      Location:763 → 804
      DUF3403; Domain of unknown function (DUF3403)
      cd14066
      Location:497 → 763
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam00954
      Location:206 → 313
      S_locus_glycop; S-locus glycoprotein domain
      pfam08276
      Location:340 → 400
      PAN_2; PAN-like domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SYA0.2

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