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    C2 calcium/lipid-binding and GRAM domain containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839519, updated on 18-Sep-2024

    Summary

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    Official Full Name
    C2 calcium/lipid-binding and GRAM domain containing protein
    Primary source
    TAIR:AT1G03370
    Locus tag
    AT1G03370
    See related
    Araport:AT1G03370
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15K9.2; F15K9_2
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (830550..835411)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ribosomal RNA processing 4 Neighboring gene RING/U-box superfamily protein Neighboring gene autophagy 18 G-like protein Neighboring gene HXXXD-type acyl-transferase family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_100219.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    C2 calcium/lipid-binding and GRAM domain containing protein
    NP_171836.3
    • C2 calcium/lipid-binding and GRAM domain containing protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), GRAM (InterPro:IPR004182), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding and GRAM domain containing protein (TAIR:AT5G50170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      830550..835411
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001331407.1 → NP_001322668.1  C2 calcium/lipid-binding and GRAM domain containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AUR4
      Conserved Domains (3) summary
      pfam00168
      Location:2 → 104
      C2; C2 domain
      pfam16016
      Location:252 → 401
      DUF4782; Domain of unknown function (DUF4782)
      cl17171
      Location:699 → 805
      PH-like; Pleckstrin homology-like domain

    2. NM_100219.5 → NP_171836.3  C2 calcium/lipid-binding and GRAM domain containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_171836.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7EAV1, Q9ZVT9
      UniProtKB/TrEMBL
      A0A5S9SE19, A0A654EBF6
      Conserved Domains (3) summary
      cd13219
      Location:699 → 812
      PH-GRAM_C2-GRAM; C2 and GRAM domain-containing protein Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam00168
      Location:2 → 104
      C2; C2 domain
      pfam16016
      Location:252 → 401
      DUF4782; Domain of unknown function (DUF4782)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZVT9.4

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