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    F-box associated ubiquitination effector family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816729, updated on 18-Sep-2024

    Summary

    Official Full Name
    F-box associated ubiquitination effector family protein
    Primary source
    TAIR:AT2G21930
    Locus tag
    AT2G21930
    See related
    Araport:AT2G21930
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F7D8.25; F7D8_25
    Summary
    A paternally expressed imprinted gene.
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    Genomic context

    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (9347641..9349178, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 96, subfamily A, polypeptide 5 Neighboring gene F-box associated ubiquitination effector family protein Neighboring gene shikimate kinase 1 Neighboring gene ncRNA Neighboring gene SKP1 interacting partner 6

    General gene information

    NM_001335779.1
    NM_127762.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
     
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     
    located_in plasmodesma HDA PubMed 

    General protein information

    Preferred Names
    F-box associated ubiquitination effector family protein
    NP_001318264.1
    • F-box associated ubiquitination effector family protein; CONTAINS InterPro DOMAIN/s: F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT4G38870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      9347641..9349178 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335779.1NP_001318264.1  F-box associated ubiquitination effector family protein [Arabidopsis thaliana]

      Status: REVIEWED

    2. NM_127762.3NP_179784.3  F-box associated ubiquitination effector family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IIJ1, Q6DR39, Q84RL5, Q9SJ06
      UniProtKB/TrEMBL
      A0A5S9X010