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    WRKY59 WRKY DNA-binding protein 59 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816726, updated on 18-Sep-2024

    Summary

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    Official Symbol
    WRKY59
    Official Full Name
    WRKY DNA-binding protein 59
    Primary source
    TAIR:AT2G21900
    Locus tag
    AT2G21900
    See related
    Araport:AT2G21900
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATWRKY59; F7D8.22; F7D8_22; WRKY DNA-binding protein 59
    Summary
    member of WRKY Transcription Factor; Group II-c
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    Genomic context

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    See WRKY59 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (9333844..9336278, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene cinnamyl alcohol dehydrogenase homolog 3 Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene cytochrome P450, family 96, subfamily A, polypeptide 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The WRKY superfamily of plant transcription factors. Eulgem T, et al. Trends Plant Sci, 2000 May. PMID 10785665
    2. A mesoscale abscisic acid hormone interactome reveals a dynamic signaling landscape in Arabidopsis. Lumba S, et al. Dev Cell, 2014 May 12. PMID 24823379
    3. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_179688.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of DNA-templated transcription ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    WRKY DNA-binding protein 59
    NP_850019.1
    • WRKY DNA-binding protein 59 (WRKY59); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 51 (TAIR:AT5G64810.1); Has 3349 Blast hits to 2895 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3334; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      9333844..9336278 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179688.2 → NP_850019.1  WRKY DNA-binding protein 59 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850019.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8VWV5, Q9SJ09
      UniProtKB/TrEMBL
      A0A178VS75, A0A5S9X021, Q1LYW5
      Conserved Domains (1) summary
      smart00774
      Location:108 → 165
      WRKY; DNA binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SJ09.2

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