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    Drought-responsive family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839432, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Drought-responsive family protein
    Primary source
    TAIR:AT1G02750
    Locus tag
    AT1G02750
    See related
    Araport:AT1G02750
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T14P4.27
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (602489..604387)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene cellulose synthase-like D5 Neighboring gene MRG family protein Neighboring gene tRNA-Lys Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Arabidopsis AtDi19 gene family encodes a novel type of Cys2/His2 zinc-finger protein implicated in ABA-independent dehydration, high-salinity stress and light signaling pathways. Milla MA, et al. Plant Mol Biol, 2006 May. PMID 16786289
    2. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001197963.1
    NM_100155.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Drought-responsive family protein
    NP_001184892.1
    • Drought-responsive family protein; INVOLVED IN: response to water deprivation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT4G02200.1).
    NP_171775.2
    • Drought-responsive family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to water deprivation; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT4G02200.1); Has 236 Blast hits to 236 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 234; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      602489..604387
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100155.4 → NP_171775.2  Drought-responsive family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_171775.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GWK1
      UniProtKB/TrEMBL
      A0A654EB95
      Conserved Domains (2) summary
      pfam05605
      Location:46 → 98
      zf-Di19; Drought induced 19 protein (Di19), zinc-binding
      pfam14571
      Location:138 → 212
      Di19_C; Stress-induced protein Di19, C-terminal

    2. NM_001197963.1 → NP_001184892.1  Drought-responsive family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001184892.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EB95, F4HXM2
      Conserved Domains (2) summary
      pfam05605
      Location:46 → 89
      zf-Di19; Drought induced 19 protein (Di19), zinc-binding
      pfam14571
      Location:122 → 196
      Di19_C; Stress-induced protein Di19, C-terminal
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8GWK1.1

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