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    XXT4 Galactosyl transferase GMA12/MNN10 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838450, updated on 18-Sep-2024

    Summary

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    Official Symbol
    XXT4
    Official Full Name
    Galactosyl transferase GMA12/MNN10 family protein
    Primary source
    TAIR:AT1G18690
    Locus tag
    AT1G18690
    See related
    Araport:AT1G18690
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F6A14.20; F6A14_20; xyloglucan xylosyltransferase 4
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    Genomic context

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    See XXT4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (6433517..6437236)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene plasmodesmata callose-binding protein 3 Neighboring gene zinc finger (C3HC4-type RING finger) family protein Neighboring gene Protein kinase superfamily protein Neighboring gene HNH endonuclease domain-containing protein Neighboring gene DNAJ heat shock N-terminal domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis GT34 family contains five xyloglucan α-1,6-xylosyltransferases. Vuttipongchaikij S, et al. New Phytol, 2012 Aug. PMID 22670626
    2. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157
    3. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. XXT4, a member of GT34 gene family exhibits xylosyltransferase activity.
      Title: Arabidopsis GT34 family contains five xyloglucan α-1,6-xylosyltransferases.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001332359.1
    NM_001332360.1
    NM_001332361.1
    NM_101727.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables UDP-xylosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables xyloglucan 6-xylosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within xyloglucan metabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in endosome HDA PubMed 
    located_in trans-Golgi network HDA PubMed 

    General protein information

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    Preferred Names
    Galactosyl transferase GMA12/MNN10 family protein
    NP_001319036.1
    • Galactosyl transferase GMA12/MNN10 family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: xyloglucan xylosyltransferase 5 (TAIR:AT1G74380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6433517..6437236
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332359.1 → NP_001319036.1  Galactosyl transferase GMA12/MNN10 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q682Q1, Q9M9U0, W8PW22
      UniProtKB/TrEMBL
      A0A178W660, A0A654EAX6
      Conserved Domains (1) summary
      PLN03182
      Location:23 → 510
      PLN03182; xyloglucan 6-xylosyltransferase; Provisional

    2. NM_001332360.1 → NP_001320635.1  Galactosyl transferase GMA12/MNN10 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q682Q1, Q9M9U0, W8PW22
      UniProtKB/TrEMBL
      A0A178W660, A0A654EAX6
      Conserved Domains (1) summary
      PLN03182
      Location:23 → 510
      PLN03182; xyloglucan 6-xylosyltransferase; Provisional

    3. NM_101727.3 → NP_173304.2  Galactosyl transferase GMA12/MNN10 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173304.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q682Q1, Q9M9U0, W8PW22
      UniProtKB/TrEMBL
      A0A178W660, A0A654EAX6
      Conserved Domains (1) summary
      PLN03182
      Location:23 → 510
      PLN03182; xyloglucan 6-xylosyltransferase; Provisional

    4. NM_001332361.1 → NP_001320634.1  Galactosyl transferase GMA12/MNN10 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q682Q1, Q9M9U0, W8PW22
      UniProtKB/TrEMBL
      A0A178W660, A0A654EAX6
      Conserved Domains (1) summary
      PLN03182
      Location:23 → 510
      PLN03182; xyloglucan 6-xylosyltransferase; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M9U0.1

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