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    epidermal patterning factor-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838322, updated on 18-Sep-2024

    Summary

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    Official Full Name
    epidermal patterning factor-like protein
    Primary source
    TAIR:AT1G17490
    Locus tag
    AT1G17490
    See related
    Araport:AT1G17490
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F28G4.23
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (6008437..6009420)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene TRF-like 3 Neighboring gene developmentally regulated G-protein 1 Neighboring gene IQ-domain 7 Neighboring gene pseudo Neighboring gene ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_101611.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    epidermal patterning factor-like protein
    NP_564026.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 57 Blast hits to 45 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6008437..6009420
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101611.3 → NP_564026.1  epidermal patterning factor-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564026.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W9L6, Q9LNQ6
    Nucleotide Protein
    Heading Accession and Version

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