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    NC domain-containing protein-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839358, updated on 18-Sep-2024

    Summary

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    Official Full Name
    NC domain-containing protein-like protein
    Primary source
    TAIR:AT1G01225
    Locus tag
    AT1G01225
    See related
    Araport:AT1G01225
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (95935..97407)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerase, subunit M, archaeal Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene L-fucokinase/GDP-L-fucose pyrophosphorylase Neighboring gene ORMDL family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_100005.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    NC domain-containing protein-like protein
    NP_563621.1
    • NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT4G00905.1); Has 173 Blast hits to 172 proteins in 34 species: Archae - 0; Bacteria - 24; Metazoa - 5; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      95935..97407
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100005.3 → NP_563621.1  NC domain-containing protein-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563621.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9S0H5, Q29PY0, Q8LBP8
      Conserved Domains (1) summary
      pfam04970
      Location:26 → 161
      LRAT; Lecithin retinol acyltransferase
    Nucleotide Protein
    Heading Accession and Version

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