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    COP1-interacting protein-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843573, updated on 18-Sep-2024

    Summary

    Official Full Name
    COP1-interacting protein-like protein
    Primary source
    TAIR:AT1G72410
    Locus tag
    AT1G72410
    See related
    Araport:AT1G72410
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T10D10.12; T10D10_12
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    Genomic context

    Location:
    chromosome: 1
    Exon count:
    11
    Sequence:
    Chromosome: 1; NC_003070.9 (27251710..27257081, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene 40s ribosomal protein SA Neighboring gene nuclear receptor coactivator Neighboring gene Chaperone DnaJ-domain superfamily protein Neighboring gene NADH:ubiquinone oxidoreductase intermediate-associated protein 30

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_105900.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    COP1-interacting protein-like protein
    NP_001319367.1
    • COP1-interacting protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17360.1).
    NP_177385.2
    • COP1-interacting protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17360.1); Has 14235 Blast hits to 10132 proteins in 704 species: Archae - 23; Bacteria - 1239; Metazoa - 6391; Fungi - 1592; Plants - 624; Viruses - 26; Other Eukaryotes - 4340 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27251710..27257081 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334527.1NP_001319367.1  COP1-interacting protein-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WRQ0, F4IDB3
    2. NM_105900.4NP_177385.2  COP1-interacting protein-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177385.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WRQ0, F4IDB4