U.S. flag

An official website of the United States government

Links from GEO Profiles

    • Showing Current items.

    rhomboid protein-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819986, updated on 18-Sep-2024

    Summary

    Official Full Name
    rhomboid protein-like protein
    Primary source
    TAIR:AT3G07950
    Locus tag
    AT3G07950
    See related
    Araport:AT3G07950
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    chromosome: 3
    Exon count:
    8
    Sequence:
    Chromosome: 3; NC_003074.8 (2531773..2534545)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene DNA glycosylase superfamily protein Neighboring gene Calcium-dependent ARF-type GTPase activating protein family Neighboring gene Phosphatidylinositol-4-phosphate 5-kinase family protein Neighboring gene Pectin lyase-like superfamily protein Neighboring gene mitogen-activated protein kinase kinase kinase 6

    Pathways from PubChem

    Interactions

    General gene information

    NM_111674.3

    Gene Ontology Provided by TAIR

    General protein information

    Preferred Names
    rhomboid protein-like protein
    NP_566326.1
    • rhomboid protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1751, integral membrane, eukaryotic (InterPro:IPR013861); Has 573 Blast hits to 573 proteins in 252 species: Archae - 14; Bacteria - 156; Metazoa - 119; Fungi - 151; Plants - 78; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      2531773..2534545
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111674.3 → NP_566326.1  rhomboid protein-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566326.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56X94, Q8LF05, Q9SFB9
      UniProtKB/TrEMBL
      A0A178VIV6, A0A5S9XBA7
      Conserved Domains (1) summary
      pfam08551
      Location:44 → 142
      DUF1751; Eukaryotic integral membrane protein (DUF1751)
    External link. Please review our privacy policy.