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    ZIP metal ion transporter family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821636, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ZIP metal ion transporter family
    Primary source
    TAIR:AT3G20870
    Locus tag
    AT3G20870
    See related
    Araport:AT3G20870
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    zinc transporter 29; ZTP29
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    12
    Sequence:
    Chromosome: 3; NC_003074.8 (7309275..7312795, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Serine/Threonine kinase catalytic domain protein Neighboring gene arabinogalactan protein 40 Neighboring gene WIP domain protein 4 Neighboring gene tRNA-Ser

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The putative Arabidopsis zinc transporter ZTP29 is involved in the response to salt stress. Wang M, et al. Plant Mol Biol, 2010 Jul. PMID 20358261
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001338493.1
    NM_001338494.1
    NM_112979.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables metal ion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in metal ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ZIP metal ion transporter family
    NP_566669.1
    • ZIP metal ion transporter family; FUNCTIONS IN: metal ion transmembrane transporter activity; INVOLVED IN: metal ion transport, transmembrane transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: ZIP metal ion transporter family (TAIR:AT3G08650.2); Has 3662 Blast hits to 3630 proteins in 1201 species: Archae - 124; Bacteria - 2163; Metazoa - 678; Fungi - 116; Plants - 147; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      7309275..7312795 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112979.4 → NP_566669.1  ZIP metal ion transporter family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566669.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q940Q3, Q9LT34
      UniProtKB/TrEMBL
      A0A5S9XE26, A0A654FA36
      Conserved Domains (1) summary
      cl00437
      Location:2 → 267
      Zip; ZIP Zinc transporter

    2. NM_001338493.1 → NP_001326770.1  ZIP metal ion transporter family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VI26, A0A1I9LQA6

    3. NM_001338494.1 → NP_001326769.1  ZIP metal ion transporter family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q940Q3, Q9LT34
      UniProtKB/TrEMBL
      A0A5S9XE26, A0A654FA36
      Conserved Domains (1) summary
      cl00437
      Location:2 → 267
      Zip; ZIP Zinc transporter
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q940Q3.1

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