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    ABCB15 ABC transporter family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822463, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ABCB15
    Official Full Name
    ABC transporter family protein
    Primary source
    TAIR:AT3G28345
    Locus tag
    AT3G28345
    See related
    Araport:AT3G28345
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATP-binding cassette B15; MDR13; multi-drug resistance 13
    Summary
    Encodes an ATP-binding cassette (ABC) transporter. Expressed in the vascular tissue of primary stem.
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    Genomic context

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    See ABCB15 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Sequence:
    Chromosome: 3; NC_003074.8 (10593690..10599042, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene F-box family protein-like protein Neighboring gene uncharacterized protein Neighboring gene galacturonosyltransferase-like 10 Neighboring gene miscRNA Neighboring gene P-glycoprotein 16

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel Aquaporin Regulatory Mechanisms Revealed by Interactomics. Bellati J, et al. Mol Cell Proteomics, 2016 Nov. PMID 27609422, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_113754.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATPase-coupled transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ABC transporter family protein
    NP_189475.1
    • ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, inflorescence meristem, cotyledon, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 17 (TAIR:AT3G28380.1); Has 822177 Blast hits to 385706 proteins in 4160 species: Archae - 14477; Bacteria - 641696; Metazoa - 17642; Fungi - 12086; Plants - 9535; Viruses - 48; Other Eukaryotes - 126693 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      10593690..10599042 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113754.3 → NP_189475.1  ABC transporter family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189475.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LHD1
      UniProtKB/TrEMBL
      A0A5S9XH76, A0A654FBF8
      Conserved Domains (3) summary
      cd03249
      Location:359 → 597
      ABC_MTABC3_MDL1_MDL2; ATP-binding cassette domain of a mitochondrial protein MTABC3 and related proteins
      PTZ00265
      Location:34 → 1235
      PTZ00265; multidrug resistance protein (mdr1); Provisional
      pfam00664
      Location:676 → 935
      ABC_membrane; ABC transporter transmembrane region
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LHD1.1

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