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    Octicosapeptide/Phox/Bem1p family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822258, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Octicosapeptide/Phox/Bem1p family protein
    Primary source
    TAIR:AT3G26510
    Locus tag
    AT3G26510
    See related
    Araport:AT3G26510
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (9710326..9712900, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene plant intracellular ras group-related LRR 2 Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of proteins that interact with catalytically active calcium-dependent protein kinases from Arabidopsis. Uno Y, et al. Mol Genet Genomics, 2009 Apr. PMID 19130088
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001338808.1
    NM_001338809.1
    NM_001338810.1
    NM_113558.5
    NM_180301.4
    NM_202636.2
    NM_202637.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Octicosapeptide/Phox/Bem1p family protein
    NP_001319647.1
    • Octicosapeptide/Phox/Bem1p family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: octicosapeptide/Phox/Bem1p (PB1) domain-containing protein (TAIR:AT1G70640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_189282.1
    • Octicosapeptide/Phox/Bem1p family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: octicosapeptide/Phox/Bem1p (PB1) domain-containing protein (TAIR:AT1G70640.1); Has 477 Blast hits to 461 proteins in 51 species: Archae - 0; Bacteria - 6; Metazoa - 20; Fungi - 21; Plants - 406; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink).
    NP_850632.2
    • Octicosapeptide/Phox/Bem1p family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: octicosapeptide/Phox/Bem1p (PB1) domain-containing protein (TAIR:AT1G70640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_974365.2
    • Octicosapeptide/Phox/Bem1p family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: octicosapeptide/Phox/Bem1p (PB1) domain-containing protein (TAIR:AT1G70640.1); Has 477 Blast hits to 461 proteins in 51 species: Archae - 0; Bacteria - 6; Metazoa - 20; Fungi - 21; Plants - 406; Viruses - 2; Other Eukaryotes - 22 (source: NCBI BLink).
    NP_974366.1
    • Octicosapeptide/Phox/Bem1p family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: octicosapeptide/Phox/Bem1p (PB1) domain-containing protein (TAIR:AT1G70640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      9710326..9712900 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_202637.3 → NP_974366.1  Octicosapeptide/Phox/Bem1p family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974366.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V7V0, A0A5S9XG98, A0A7G2ELN7, B9DG75, Q3EAZ7, Q6ID88
      Conserved Domains (1) summary
      cd06410
      Location:13 → 112
      PB1_UP2; Uncharacterized protein 2. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. ...

    2. NM_180301.4 → NP_850632.2  Octicosapeptide/Phox/Bem1p family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850632.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V7V0, A0A5S9XG98, A0A7G2ELN7, B9DG75, Q3EAZ7, Q6ID88
      Conserved Domains (1) summary
      cd06410
      Location:13 → 112
      PB1_UP2; Uncharacterized protein 2. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. ...

    3. NM_001338808.1 → NP_001319647.1  Octicosapeptide/Phox/Bem1p family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V7V0, A0A5S9XG98, A0A7G2ELN7, B9DG75, Q3EAZ7, Q6ID88
      Conserved Domains (1) summary
      cd06410
      Location:13 → 112
      PB1_UP2; Uncharacterized protein 2. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. ...

    4. NM_001338809.1 → NP_001326533.1  Octicosapeptide/Phox/Bem1p family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V7V0, A0A5S9XG98, A0A7G2ELN7, B9DG75, Q3EAZ7, Q6ID88
      Conserved Domains (1) summary
      cd06410
      Location:13 → 112
      PB1_UP2; Uncharacterized protein 2. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. ...

    5. NM_202636.2 → NP_974365.2  Octicosapeptide/Phox/Bem1p family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974365.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V7V0, A0A5S9XG98, A0A7G2ELN7, B9DG75, Q3EAZ7, Q6ID88
      Conserved Domains (1) summary
      cd06410
      Location:13 → 112
      PB1_UP2; Uncharacterized protein 2. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. ...

    6. NM_001338810.1 → NP_001326534.1  Octicosapeptide/Phox/Bem1p family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q27GK5

    7. NM_113558.5 → NP_189282.1  Octicosapeptide/Phox/Bem1p family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189282.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V7V0, A0A5S9XG98, A0A7G2ELN7, B9DG75, Q3EAZ7, Q6ID88
      Conserved Domains (1) summary
      cd06410
      Location:13 → 112
      PB1_UP2; Uncharacterized protein 2. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. ...
    Nucleotide Protein
    Heading Accession and Version

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