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    ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818074, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein
    Primary source
    TAIR:AT2G35080
    Locus tag
    AT2G35080
    See related
    Araport:AT2G35080
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T4C15.25; T4C15_25
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    9
    Sequence:
    Chromosome: 2; NC_003071.7 (14789245..14791448, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene transmembrane protein, putative (DUF1640) Neighboring gene Exostosin family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001161080.1
    NM_129061.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein
    NP_001154552.1
    • nucleotide binding;ATP binding;aminoacyl-tRNA ligases; FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: aminoacyl-tRNA ligases;ATP binding;nucleotide binding (TAIR:AT3G42723.1); Has 7 Blast hits to 7 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_181053.4
    • nucleotide binding;ATP binding;aminoacyl-tRNA ligases; FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: aminoacyl-tRNA ligases;ATP binding;nucleotide binding (TAIR:AT3G42723.1); Has 7 Blast hits to 7 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14789245..14791448 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001161080.1 → NP_001154552.1  ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154552.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IJR9

    2. NM_129061.4 → NP_181053.4  ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181053.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IJS0, O82183
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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