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    HSP20-like chaperones superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828006, updated on 18-Sep-2024

    Summary

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    Official Full Name
    HSP20-like chaperones superfamily protein
    Primary source
    TAIR:AT4G02450
    Locus tag
    AT4G02450
    See related
    Araport:AT4G02450
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T14P8.5; T14P8_5
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (1073753..1075930, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene LYR motif protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene F-box family protein Neighboring gene ncRNA Neighboring gene DNA mismatch repair protein Neighboring gene uncharacterized protein Neighboring gene AAA-type ATPase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phosphorylation of p23-1 cochaperone by protein kinase CK2 affects root development in Arabidopsis. D'Alessandro S, et al. Sci Rep, 2019 Jul 8. PMID 31285503, Free PMC Article
    2. The co-chaperone p23 controls root development through the modulation of auxin distribution in the Arabidopsis root meristem. D'Alessandro S, et al. J Exp Bot, 2015 Aug. PMID 26163704, Free PMC Article
    3. Characterization of plant p23-like proteins for their co-chaperone activities. Zhang Z, et al. Cell Stress Chaperones, 2010 Sep. PMID 20349287, Free PMC Article
    4. Structural and functional analysis of SGT1-HSP90 core complex required for innate immunity in plants. Kadota Y, et al. EMBO Rep, 2008 Dec. PMID 18833289, Free PMC Article
    5. The p23 co-chaperone protein is a novel substrate of CK2 in Arabidopsis. Tosoni K, et al. Mol Cell Biochem, 2011 Oct. PMID 21735091

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Phosphorylation of p23-1 cochaperone by protein kinase CK2 affects root development in Arabidopsis.
      Title: Phosphorylation of p23-1 cochaperone by protein kinase CK2 affects root development in Arabidopsis.
    2. The functional characterization of the two isoforms of p23 in Arabidopsis thaliana is reported, suggesting a key role of p23 in the regulation of root development. Arabidopsis p23 mutants show a short root length phenotype with a reduced meristem length.
      Title: The co-chaperone p23 controls root development through the modulation of auxin distribution in the Arabidopsis root meristem.
    3. The Arabidopsis co-chaperone protein p23 is a CK2 target.[p23-1]
      Title: The p23 co-chaperone protein is a novel substrate of CK2 in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001160729.1
    NM_116478.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables Hsp90 protein binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein-folding chaperone binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chaperone cofactor-dependent protein refolding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within negative regulation of cytokinin-activated signaling pathway IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within positive regulation of gene expression IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of auxin polar transport IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in response to heat IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within root meristem growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane HDA PubMed 
    located_in plasmodesma HDA PubMed 
    part_of protein folding chaperone complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    HSP20-like chaperones superfamily protein
    NP_001154201.1
    • HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT3G03773.1); Has 981 Blast hits to 954 proteins in 256 species: Archae - 7; Bacteria - 144; Metazoa - 401; Fungi - 86; Plants - 167; Viruses - 20; Other Eukaryotes - 156 (source: NCBI BLink).
    NP_192154.2
    • HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT3G03773.1); Has 51861 Blast hits to 12232 proteins in 1049 species: Archae - 75; Bacteria - 28612; Metazoa - 10233; Fungi - 1929; Plants - 4069; Viruses - 438; Other Eukaryotes - 6505 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      1073753..1075930 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116478.5 → NP_192154.2  HSP20-like chaperones superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192154.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O81288, Q8L7U4, Q9FT78
      UniProtKB/TrEMBL
      A0A178UZE3
      Conserved Domains (1) summary
      cd06465
      Location:5 → 112
      p23_hB-ind1_like; p23_like domain found in human (h) butyrate-induced transcript 1 (B-ind1) and similar proteins. hB-ind1 participates in signaling by the small GTPase Rac1. It binds to Rac1 and enhances different Rac1 effects including activation of nuclear factor (NF) ...

    2. NM_001160729.1 → NP_001154201.1  HSP20-like chaperones superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154201.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZE3, F4JHJ0
      Conserved Domains (1) summary
      cd06465
      Location:5 → 112
      p23_hB-ind1_like; p23_like domain found in human (h) butyrate-induced transcript 1 (B-ind1) and similar proteins. hB-ind1 participates in signaling by the small GTPase Rac1. It binds to Rac1 and enhances different Rac1 effects including activation of nuclear factor (NF) ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L7U4.1

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