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    UTr7 UDP-N-acetylglucosamine (UAA) transporter family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829287, updated on 18-Sep-2024

    Summary

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    Official Symbol
    UTr7
    Official Full Name
    UDP-N-acetylglucosamine (UAA) transporter family
    Primary source
    TAIR:AT4G31600
    Locus tag
    AT4G31600
    See related
    Araport:AT4G31600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F28M20.210; F28M20_210; UDP-galactose transporter 7
    Summary
    Encodes a Golgi-localized UDP#Aeiglucose/UDP#Aeigalactose transporter that affects lateral root emergence.
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    Genomic context

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    See UTr7 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (15314867..15317160, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene serine/arginine-rich 22 Neighboring gene Cellulose-synthase-like C5 Neighboring gene Transcriptional factor B3 family protein Neighboring gene Transcriptional factor B3 family protein Neighboring gene Transcriptional factor B3 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis thaliana AtUTr7 encodes a golgi-localized UDP-glucose/UDP-galactose transporter that affects lateral root emergence. Handford M, et al. Mol Plant, 2012 Nov. PMID 22933714
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. characteristics of a UDP-galactose transporter that affects lateral root emergence
      Title: Arabidopsis thaliana AtUTr7 encodes a golgi-localized UDP-glucose/UDP-galactose transporter that affects lateral root emergence.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001036688.1
    NM_119309.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables UDP-galactose transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables UDP-glucose transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within UDP-galactose transmembrane transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within UDP-glucose transmembrane transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within lateral root development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within root hair cell development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    UDP-N-acetylglucosamine (UAA) transporter family
    NP_001031765.1
    • UDP-N-acetylglucosamine (UAA) transporter family; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT4G32272.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_567879.1
    • UDP-N-acetylglucosamine (UAA) transporter family; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT4G32272.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      15314867..15317160 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119309.4 → NP_567879.1  UDP-N-acetylglucosamine (UAA) transporter family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567879.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q94B65, Q9SB76
      UniProtKB/TrEMBL
      A0A178UUW5, A0A5S9XXM8, A0A654FUK2
      Conserved Domains (1) summary
      COG5070
      Location:15 → 311
      VRG4; Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

    2. NM_001036688.1 → NP_001031765.1  UDP-N-acetylglucosamine (UAA) transporter family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031765.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JSQ2
      Conserved Domains (1) summary
      cl23754
      Location:102 → 254
      EamA; EamA-like transporter family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q94B65.1

    Gene LinkOut

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