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    MYB87 myb domain protein 87 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829934, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MYB87
    Official Full Name
    myb domain protein 87
    Primary source
    TAIR:AT4G37780
    Locus tag
    AT4G37780
    See related
    Araport:AT4G37780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATMYB87; myb domain protein 87; T28I19.60; T28I19_60
    Summary
    ''encoded by the Myb-like transcription factor MYB87, regulates axillary meristem formation, expressed throughout the plant. Member of the R2R3 factor gene family.''
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    Genomic context

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    See MYB87 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (17758232..17759746, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene squalene epoxidase 3 Neighboring gene 1-amino-cyclopropane-1-carboxylate synthase 8 Neighboring gene ncRNA Neighboring gene Homeobox-leucine zipper protein family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Chimeric repressor analysis identifies MYB87 as a possible regulator of morphogenesis via cell wall organization and remodeling in Arabidopsis. Fujiwara S, et al. Biotechnol Lett, 2014 May. PMID 24563287
    2. Different mechanisms participate in the R-dependent activity of the R2R3 MYB transcription factor C1. Hernandez JM, et al. J Biol Chem, 2004 Nov 12. PMID 15347654
    3. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
    4. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
    5. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_119940.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in plant-type cell wall organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    myb domain protein 87
    NP_195492.2
    • myb domain protein 87 (MYB87); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 8573 Blast hits to 8093 proteins in 467 species: Archae - 0; Bacteria - 0; Metazoa - 622; Fungi - 441; Plants - 5850; Viruses - 3; Other Eukaryotes - 1657 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17758232..17759746 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119940.5 → NP_195492.2  myb domain protein 87 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195492.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0MFC7, F4JSU0, O49806, Q7DLH1, Q9T066
      UniProtKB/TrEMBL
      A0A178V4J2, A0A5S9Y003
      Conserved Domains (1) summary
      cl28544
      Location:5 → 122
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4JSU0.1

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