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    BG1 beta-1,3-glucanase 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824894, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BG1
    Official Full Name
    beta-1,3-glucanase 1
    Primary source
    TAIR:AT3G57270
    Locus tag
    AT3G57270
    See related
    Araport:AT3G57270
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''beta-1; 3-glucanase 1; 3-glucanase 1''; beta-1
    Summary
    encodes a member of glycosyl hydrolase family 17
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    Genomic context

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    See BG1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (21191237..21193189, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Emsy N Terminus (ENT) domain-containing protein Neighboring gene beta-1,3-glucanase 2 Neighboring gene Transmembrane proteins 14C Neighboring gene eukaryotic translation initiation factor 3E Neighboring gene DNA helicase INO80-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_115587.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glucan endo-1,3-beta-D-glucosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    beta-1,3-glucanase 1
    NP_191286.1
    • ''beta-1,3-glucanase 1'' (BG1); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 2 (TAIR:AT3G57260.1); Has 2220 Blast hits to 2205 proteins in 171 species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 67; Plants - 2133; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      21191237..21193189 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115587.2 → NP_191286.1  beta-1,3-glucanase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191286.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0MF30, Q8LG04, Q9M2M0
      UniProtKB/TrEMBL
      A0A5S9XLU8, A0A654FIM0
      Conserved Domains (1) summary
      pfam00332
      Location:27 → 339
      Glyco_hydro_17; Glycosyl hydrolases family 17
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M2M0.1

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