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    PRA1.A1 prenylated RAB acceptor 1.A1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831904, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PRA1.A1
    Official Full Name
    prenylated RAB acceptor 1.A1
    Primary source
    TAIR:AT5G02040
    Locus tag
    AT5G02040
    See related
    Araport:AT5G02040
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    prenylated RAB acceptor 1.A1; T7H20.90; T7H20_90
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    Genomic context

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    See PRA1.A1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    8
    Sequence:
    Chromosome: 5; NC_003076.8 (400899..402990)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene POX (plant homeobox) family protein Neighboring gene ncRNA Neighboring gene Mitochondrial glycoprotein family protein Neighboring gene Uncharacterized protein family (UPF0497) Neighboring gene uncharacterized protein Neighboring gene Protein kinase family protein Neighboring gene phosphopantothenate-cysteine ligase-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The PRA1 gene family in Arabidopsis. Alvim Kamei CL, et al. Plant Physiol, 2008 Aug. PMID 18583532, Free PMC Article
    2. The Arabidopsis Proteins AtNHR2A and AtNHR2B Are Multi-Functional Proteins Integrating Plant Immunity With Other Biological Processes. Singh R, et al. Front Plant Sci, 2020. PMID 32194606, Free PMC Article
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_120282.4
    NM_180422.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within vesicle-mediated transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    prenylated RAB acceptor 1.A1
    NP_195824.1
    • prenylated RAB acceptor 1.A1 (PRA1.A1); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT3G11402.2); Has 236 Blast hits to 236 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 12; Plants - 110; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    NP_850753.1
    • prenylated RAB acceptor 1.A1 (PRA1.A1); CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT3G11402.2); Has 236 Blast hits to 236 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 12; Plants - 110; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      400899..402990
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120282.4 → NP_195824.1  prenylated RAB acceptor 1.A1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195824.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LDR7, Q940L1, Q9LZM7
      UniProtKB/TrEMBL
      A0A178UBN9, A0A5S9Y0M5, A0A654FXM8
      Conserved Domains (1) summary
      pfam03208
      Location:19 → 192
      PRA1; PRA1 family protein

    2. NM_180422.1 → NP_850753.1  prenylated RAB acceptor 1.A1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850753.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LDR7, Q940L1, Q9LZM7
      UniProtKB/TrEMBL
      A0A178UBN9, A0A5S9Y0M5, A0A654FXM8
      Conserved Domains (1) summary
      pfam03208
      Location:19 → 192
      PRA1; PRA1 family protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LZM7.1

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