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    SCPL19 serine carboxypeptidase-like 19 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830823, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SCPL19
    Official Full Name
    serine carboxypeptidase-like 19
    Primary source
    TAIR:AT5G09640
    Locus tag
    AT5G09640
    See related
    Araport:AT5G09640
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17I14.170; F17I14_170; serine carboxypeptidase-like 19; SINAPOYLGLUCOSE ACCUMULATOR 2; SNG2
    Summary
    encodes a serine carboxypeptidase-like (SCPL) protein. Mutants accumulate sinapoylglucose instead of sinapoylcholine, and have increased levels of choline and decreased activity of the enzyme sinapoylglucose:choline sinapoyltransferase.
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    Genomic context

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    See SCPL19 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    14
    Sequence:
    Chromosome: 5; NC_003076.8 (2988314..2991156)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Octicosapeptide/Phox/Bem1p family protein Neighboring gene LisH/CRA/RING-U-box domains-containing protein Neighboring gene pyrophosphorylase 6 Neighboring gene tRNA-Val Neighboring gene peroxisomal NAD-malate dehydrogenase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The sng2 mutant of Arabidopsis is defective in the gene encoding the serine carboxypeptidase-like protein sinapoylglucose:choline sinapoyltransferase. Shirley AM, et al. Plant J, 2001 Oct. PMID 11696189
    2. Pleiotropic changes in Arabidopsis f5h and sct mutants revealed by large-scale gene expression and metabolite analysis. Huang J, et al. Planta, 2009 Oct. PMID 19714359
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_121001.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables sinapoylglucose-choline O-sinapoyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables sinapoyltransferase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within secondary metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    serine carboxypeptidase-like 19
    NP_568215.2
    • serine carboxypeptidase-like 19 (SCPL19); FUNCTIONS IN: sinapoyltransferase activity, serine-type carboxypeptidase activity; INVOLVED IN: proteolysis, secondary metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 3 (TAIR:AT1G73280.1); Has 3721 Blast hits to 3663 proteins in 396 species: Archae - 0; Bacteria - 292; Metazoa - 624; Fungi - 837; Plants - 1544; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2988314..2991156
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121001.2 → NP_568215.2  serine carboxypeptidase-like 19 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568215.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8VZU3, Q941P1, Q9FXX7, Q9LXC8
      UniProtKB/TrEMBL
      A0A178UF14, A0A5S9Y340
      Conserved Domains (1) summary
      cl08270
      Location:4 → 465
      Peptidase_S10; Serine carboxypeptidase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8VZU3.1

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