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    Calcium-dependent lipid-binding (CaLB domain) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833752, updated on 18-Sep-2024

    Summary

    Official Full Name
    Calcium-dependent lipid-binding (CaLB domain) family protein
    Primary source
    TAIR:AT5G37740
    Locus tag
    AT5G37740
    See related
    Araport:AT5G37740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K12B20.22; K12B20_22
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    Genomic context

    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (14991880..14993781)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene miscRNA Neighboring gene Chaperone DnaJ-domain superfamily protein Neighboring gene Chaperone DnaJ-domain superfamily protein Neighboring gene EF hand calcium-binding protein family

    Interactions

    General gene information

    NM_001203502.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTPase activator activity  
    enables lipid binding  
    enables phospholipid binding PubMed 
    enables protein binding PubMed 
    enables protein homodimerization activity  
    Component Evidence Code Pubs
    located_in nucleus PubMed 
    located_in plasma membrane PubMed 
    located_in plasma membrane  

    General protein information

    Preferred Names
    Calcium-dependent lipid-binding (CaLB domain) family protein
    NP_001190431.1
    • Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G66360.1).
    NP_198590.1
    • Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G66360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      14991880..14993781
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123133.4 → NP_198590.1  Calcium-dependent lipid-binding (CaLB domain) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198590.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C0Z2Y5, Q9FHP6
      UniProtKB/TrEMBL
      A0A178UGX2, A0A5S9Y9E1
      Conserved Domains (1) summary
      cd04038
      Location:5 → 151
      C2_ArfGAP; C2 domain present in Arf GTPase Activating Proteins (GAP)
    2. NM_001203502.1 → NP_001190431.1  Calcium-dependent lipid-binding (CaLB domain) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190431.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4K8L6
      Conserved Domains (1) summary
      cl14603
      Location:5 → 161
      C2; C2 domain
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