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    AIG2-like (avirulence induced gene) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833969, updated on 18-Sep-2024

    Summary

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    Official Full Name
    AIG2-like (avirulence induced gene) family protein
    Primary source
    TAIR:AT5G39730
    Locus tag
    AT5G39730
    See related
    Araport:AT5G39730
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MKM21.20; MKM21_20
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (15901569..15902958)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene lysine histidine transporter-like protein Neighboring gene avirulence induced protein 2 like protein Neighboring gene ribosomal protein L5 B Neighboring gene AGAMOUS-like 81

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2004 Jul. PMID 15060130
    2. A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2007 Nov. PMID 17644812
    3. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    4. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    5. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_123335.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane HDA PubMed 
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    AIG2-like (avirulence induced gene) family protein
    NP_198789.1
    • AIG2-like (avirulence induced gene) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: avirulence induced gene 2 like protein (TAIR:AT5G39720.1); Has 284 Blast hits to 284 proteins in 86 species: Archae - 10; Bacteria - 64; Metazoa - 0; Fungi - 51; Plants - 104; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      15901569..15902958
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123335.4 → NP_198789.1  AIG2-like (avirulence induced gene) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198789.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FIX1
      UniProtKB/TrEMBL
      A0A178U7K5, A0A5S9YBQ5, A0A654G6I0
      Conserved Domains (1) summary
      pfam06094
      Location:12 → 124
      GGACT; Gamma-glutamyl cyclotransferase, AIG2-like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FIX1.1

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