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    Pectinacetylesterase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834564, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Pectinacetylesterase family protein
    Primary source
    TAIR:AT5G45280
    Locus tag
    AT5G45280
    See related
    Araport:AT5G45280
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K9E15.6; K9E15_6; PAE11; pectin acetylesterase 11
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    13
    Sequence:
    Chromosome: 5; NC_003076.8 (18345534..18349695)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene inhibitor of trypsin/hageman factor-like protein Neighboring gene RING/U-box superfamily protein Neighboring gene beta-amylase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: identification by mass spectrometry and bioinformatics. Boudart G, et al. Proteomics, 2005 Jan. PMID 15593128
    2. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    3. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
    4. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    5. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_123896.4
    NM_180804.1

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type cell wall HDA PubMed 
    located_in plasma membrane HDA PubMed 
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    Pectinacetylesterase family protein
    NP_199341.1
    • Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 566 Blast hits to 560 proteins in 97 species: Archae - 2; Bacteria - 42; Metazoa - 118; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
    NP_851135.1
    • Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.2); Has 552 Blast hits to 548 proteins in 96 species: Archae - 2; Bacteria - 42; Metazoa - 115; Fungi - 0; Plants - 290; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      18345534..18349695
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123896.4 → NP_199341.1  Pectinacetylesterase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199341.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LAE9, Q93ZX9, Q9FH82
      UniProtKB/TrEMBL
      A0A5S9YBU9, A0A654G889
      Conserved Domains (1) summary
      pfam03283
      Location:24 → 368
      PAE; Pectinacetylesterase

    2. NM_180804.1 → NP_851135.1  Pectinacetylesterase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851135.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FH82
      Conserved Domains (1) summary
      pfam03283
      Location:24 → 306
      PAE; Pectinacetylesterase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FH82.1

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