XTH13 xyloglucan endotransglucosylase/hydrolase 13 [Arabidopsis thaliana (thale cress)] - Gene

Summary

Official Symbol: XTH13
Official Full Name: xyloglucan endotransglucosylase/hydrolase 13
Primary source: TAIR:AT5G57540
Locus tag: AT5G57540
See related: Araport:AT5G57540
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: AtXTH13; MUA2.11; MUA2_11; xyloglucan endotransglucosylase/hydrolase 13
Summary: Encodes a xyloglucan endotransglucosylase/hydrolase with only only the endotransglucosylase (XET; EC 2.4.1.207) activity towards xyloglucan and non-detectable endohydrolytic (XEH; EC 3.2.1.151) activity.
NEW: Try the new Gene table
Try the new Transcript table

Chromosome 5 - NC_003076.8 Genomic Context describing neighboring genes

Go to nucleotide: Graphics FASTA GenBank

Submit: New GeneRIF Correction

Function	Evidence Code	Pubs
enables polysaccharide binding	ISS Inferred from Sequence or Structural Similarity more info
NOT enables xyloglucan-specific endo-beta-1,4-glucanase activity	IDA Inferred from Direct Assay more info	PubMed
enables xyloglucan:xyloglucosyl transferase activity	IDA Inferred from Direct Assay more info	PubMed

Process	Evidence Code	Pubs
involved_in cell wall biogenesis	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within xyloglucan metabolic process	IDA Inferred from Direct Assay more info	PubMed

Component	Evidence Code	Pubs
located_in extracellular region	ISM Inferred from Sequence Model more info

NP_200562.1

xyloglucan endotransglucosylase/hydrolase 13 (XTH13); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan endotransglucosylase activity; INVOLVED IN: xyloglucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Beta-glucanase (InterPro:IPR008264), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16, active site (InterPro:IPR008263), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 12 (TAIR:AT5G57530.1); Has 2225 Blast hits to 2203 proteins in 306 species: Archae - 0; Bacteria - 288; Metazoa - 0; Fungi - 452; Plants - 1385; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink).

NEW Try the new Transcript table

The following sections contain reference sequences that belong to a specific genome build. Explain