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    Cand1 plasminogen activator inhibitor [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842144, updated on 18-Sep-2024

    Summary

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    Official Symbol
    Cand1
    Official Full Name
    plasminogen activator inhibitor
    Primary source
    TAIR:AT1G57680
    Locus tag
    AT1G57680
    See related
    Araport:AT1G57680
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    candidate G-protein Coupled Receptor 1; T8L23.15; T8L23_15
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    Genomic context

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    See Cand1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (21362359..21364749, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Toll-Interleukin-Resistance (TIR) domain family protein Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene F-box/RNI-like superfamily protein Neighboring gene Protein kinase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001333804.1
    NM_104565.5
    NM_202315.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    plasminogen activator inhibitor
    NP_176081.1
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031277 (InterPro:IPR016971); Has 70 Blast hits to 70 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
    NP_974044.1
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031277 (InterPro:IPR016971); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      21362359..21364749 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104565.5 → NP_176081.1  plasminogen activator inhibitor [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176081.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W4I1, A0A654EJ47, Q9FVT5

    2. NM_001333804.1 → NP_001320917.1  plasminogen activator inhibitor [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W4I1, A0A654EJ47, Q9FVT5

    3. NM_202315.1 → NP_974044.1  plasminogen activator inhibitor [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974044.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W4I1, A0A654EJ47, Q9FVT5
    Nucleotide Protein
    Heading Accession and Version

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