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    Photosystem II manganese-stabilising protein (PsbO) family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829877, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Photosystem II manganese-stabilising protein (PsbO) family
    Primary source
    TAIR:AT4G37230
    Locus tag
    AT4G37230
    See related
    Araport:AT4G37230
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AP22.76; AP22_76
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (17516424..17517587)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene Cold acclimation protein WCOR413 family Neighboring gene ncRNA Neighboring gene Uncharacterized protein family (UPF0497) Neighboring gene HTH-type transcriptional regulator

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. High light stimulates Deg1-dependent cleavage of the minor LHCII antenna proteins CP26 and CP29 and the PsbS protein in Arabidopsis thaliana. Zienkiewicz M, et al. Planta, 2012 Feb. PMID 21877139
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_119886.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables oxygen evolving activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in photosystem II assembly IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in photosystem II stabilization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    part_of photosystem II oxygen evolving complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Photosystem II manganese-stabilising protein (PsbO) family
    NP_195440.1
    • Photosystem II manganese-stabilising protein (PsbO) family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosystem II stabilization, photosynthesis; LOCATED IN: oxygen evolving complex, extrinsic to membrane; CONTAINS InterPro DOMAIN/s: Photosystem II manganese-stabilising protein PsbO (InterPro:IPR002628); BEST Arabidopsis thaliana protein match is: PS II oxygen-evolving complex 1 (TAIR:AT5G66570.1); Has 429 Blast hits to 429 proteins in 136 species: Archae - 0; Bacteria - 140; Metazoa - 1; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17516424..17517587
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119886.1 → NP_195440.1  Photosystem II manganese-stabilising protein (PsbO) family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195440.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9SW65
      Conserved Domains (1) summary
      cl23911
      Location:1 → 142
      MSP; Manganese-stabilizing protein / photosystem II polypeptide
    Nucleotide Protein
    Heading Accession and Version

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