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    FRL2 FRIGIDA like 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840070, updated on 18-Sep-2024

    Summary

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    Official Symbol
    FRL2
    Official Full Name
    FRIGIDA like 2
    Primary source
    TAIR:AT1G31814
    Locus tag
    AT1G31814
    See related
    Araport:AT1G31814
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F5M6.26; F5M6_26; FRIGIDA like 2
    Summary
    family member of FRI-related genes that is required for the winter-annual habit. Genbank accession BK004885
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    Genomic context

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    See FRL2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (11412392..11414502, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 97, subfamily A, polypeptide 3 Neighboring gene Formin Homology 14 Neighboring gene acyl-CoA-binding protein 6 Neighboring gene Ribosomal L18p/L5e family protein Neighboring gene Amino acid permease family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. FRIGIDA LIKE 2 is a functional allele in Landsberg erecta and compensates for a nonsense allele of FRIGIDA LIKE 1. Schläppi MR. Plant Physiol, 2006 Dec. PMID 17056759, Free PMC Article
    2. FRIGIDA-related genes are required for the winter-annual habit in Arabidopsis. Michaels SD, et al. Proc Natl Acad Sci U S A, 2004 Mar 2. PMID 14973192, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_102917.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within vegetative to reproductive phase transition of meristem IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    FRIGIDA like 2
    NP_174463.1
    • FRIGIDA like 2 (FRL2); CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA like 1 (TAIR:AT5G16320.1); Has 1031 Blast hits to 989 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 5; Plants - 1010; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      11412392..11414502 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102917.4 → NP_174463.1  FRIGIDA like 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174463.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C6S2
      UniProtKB/TrEMBL
      A0A5S9WKC5
      Conserved Domains (1) summary
      pfam07899
      Location:82 → 360
      Frigida; Frigida-like protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C6S2.1

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