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    transcriptional factor B3 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817004, updated on 18-Sep-2024

    Summary

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    Official Full Name
    transcriptional factor B3 family protein
    Primary source
    TAIR:AT2G24680
    Locus tag
    AT2G24680
    See related
    Araport:AT2G24680
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F25P17.2; F25P17_2
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    7
    Sequence:
    Chromosome: 2; NC_003071.7 (10493263..10497009, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene B3 domain-containing protein REM13 Neighboring gene pseudo Neighboring gene B3 domain protein (DUF313) Neighboring gene AP2/B3-like transcriptional factor family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001335958.1
    NM_128029.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    transcriptional factor B3 family protein
    NP_001318284.1
    • transcriptional factor B3 family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: DNA binding;DNA binding;sequence-specific DNA binding transcription factors (TAIR:AT2G24650.1).
    NP_180044.2
    • transcriptional factor B3 family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: DNA binding;DNA binding;sequence-specific DNA binding transcription factors (TAIR:AT2G24650.1); Has 665 Blast hits to 176 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 663; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10493263..10497009 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335951.1 → NP_001318284.1  transcriptional factor B3 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X0V1, A0A654EVU4, F4IPS6

    2. NM_001335953.1 → NP_001323571.1  transcriptional factor B3 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AXK5

    3. NM_001335952.1 → NP_001323572.1  transcriptional factor B3 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AXF7

    4. NM_001335956.1 → NP_001323568.1  transcriptional factor B3 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AXF8, A0A5S9X0V1, A0A654EVU4

    5. NM_001335955.1 → NP_001323569.1  transcriptional factor B3 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AXH6, A0A5S9X0V1, A0A654EVU4

    6. NM_001335954.1 → NP_001323570.1  transcriptional factor B3 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AXF6

    7. NM_001335957.1 → NP_001323567.1  transcriptional factor B3 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AXF6

    8. NM_128029.2 → NP_180044.2  transcriptional factor B3 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180044.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P0CAP4
      Conserved Domains (1) summary
      smart01019
      Location:57 → 153
      B3; B3 DNA binding domain

    9. NM_001335958.1 → NP_001323566.1  transcriptional factor B3 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AXH7
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0CAP4.1

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