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    pantothenate kinase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816239, updated on 18-Sep-2024

    Summary

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    Official Full Name
    pantothenate kinase
    Primary source
    TAIR:AT2G17320
    Locus tag
    AT2G17320
    See related
    Araport:AT2G17320
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F5J6.8; F5J6_8
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    12
    Sequence:
    Chromosome: 2; NC_003071.7 (7533455..7536004, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene F-box/LRR protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene miscRNA Neighboring gene pantothenate kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001335546.1
    NM_127287.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables pantothenate kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in coenzyme A biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    pantothenate kinase
    NP_179324.2
    • Uncharacterised conserved protein (UCP030210); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF89 (InterPro:IPR002791), Uncharacterised conserved protein UCP030210 (InterPro:IPR016949); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein (UCP030210) (TAIR:AT2G17340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      7533455..7536004 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127287.5 → NP_179324.2  pantothenate kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179324.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VQN4, A0A654ETK7, B9DH75, Q6NLB4
      Conserved Domains (1) summary
      pfam01937
      Location:42 → 353
      DUF89; Protein of unknown function DUF89

    2. NM_001335546.1 → NP_001323667.1  pantothenate kinase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VSI6, A0A1P8AXW1, A0A384L0N0, A0A654ETK7, Q6NLB4
    Nucleotide Protein
    Heading Accession and Version

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