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    VSR2 VACUOLAR SORTING RECEPTOR 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817579, updated on 18-Sep-2024

    Summary

    Official Symbol
    VSR2
    Official Full Name
    VACUOLAR SORTING RECEPTOR 2
    Primary source
    TAIR:AT2G30290
    Locus tag
    AT2G30290
    See related
    Araport:AT2G30290
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtVSR2; binding protein of 80 kDa 1;2; BP80-1;2; T9D9.10; T9D9_10; VACUOLAR SORTING RECEPTOR 1;2; VACUOLAR SORTING RECEPTOR 2; VSR1;2
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    Genomic context

    See VSR2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    14
    Sequence:
    Chromosome: 2; NC_003071.7 (12912519..12915915, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene LURP-one-like protein (DUF567) Neighboring gene RNA-directed DNA methylation 4 Neighboring gene Major facilitator superfamily protein Neighboring gene GDSL-like Lipase/Acylhydrolase family protein

    General gene information

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within protein targeting to vacuole TAS
    Traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of Golgi transport complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    VACUOLAR SORTING RECEPTOR 2
    NP_001189637.1
    • VACUOLAR SORTING RECEPTOR 2 (VSR2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: protein targeting to vacuole; LOCATED IN: integral to plasma membrane, Golgi transport complex; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF calcium-binding (InterPro:IPR013091), EGF-like calcium-binding (InterPro:IPR001881), Growth factor, receptor (InterPro:IPR009030); BEST Arabidopsis thaliana protein match is: vacuolar sorting receptor homolog 1 (TAIR:AT3G52850.1).
    NP_180588.1
    • VACUOLAR SORTING RECEPTOR 2 (VSR2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: protein targeting to vacuole; LOCATED IN: integral to plasma membrane, Golgi transport complex; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF calcium-binding (InterPro:IPR013091), Growth factor, receptor (InterPro:IPR009030); BEST Arabidopsis thaliana protein match is: vacuolar sorting receptor homolog 1 (TAIR:AT3G52850.1); Has 9164 Blast hits to 4504 proteins in 203 species: Archae - 2; Bacteria - 77; Metazoa - 8165; Fungi - 0; Plants - 402; Viruses - 2; Other Eukaryotes - 516 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      12912519..12915915 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001202708.1NP_001189637.1  VACUOLAR SORTING RECEPTOR 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189637.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VWV3, A0A5S9X2N7, F4IMR9
      Conserved Domains (2) summary
      smart00179
      Location:516544
      EGF_CA; Calcium-binding EGF-like domain
      cl10459
      Location:50177
      Peptidases_S8_S53; Peptidase domain in the S8 and S53 families
    2. NM_128582.2NP_180588.1  VACUOLAR SORTING RECEPTOR 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180588.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O22925, Q1PEY7
      UniProtKB/TrEMBL
      A0A178VWV3, A0A5S9X2N7
      Conserved Domains (2) summary
      smart00179
      Location:516544
      EGF_CA; Calcium-binding EGF-like domain
      cl10459
      Location:50177
      Peptidases_S8_S53; Peptidase domain in the S8 and S53 families