U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PMZ zinc finger (AN1-like) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822447, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PMZ
    Official Full Name
    zinc finger (AN1-like) family protein
    Primary source
    TAIR:AT3G28210
    Locus tag
    AT3G28210
    See related
    Araport:AT3G28210
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    SAP12; STRESS-ASSOCIATED PROTEIN 12
    Summary
    Encodes a putative zinc finger protein (PMZ).
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PMZ in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (10520443..10521796)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Peroxidase superfamily protein Neighboring gene uncharacterized protein Neighboring gene TRAF-like family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Transcriptome analysis reveals specific modulation of abscisic acid signaling by ROP10 small GTPase in Arabidopsis. Xin Z, et al. Plant Physiol, 2005 Nov. PMID 16258012, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_001338949.1
    NM_113740.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to abscisic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    zinc finger (AN1-like) family protein
    NP_189461.1
    • PMZ; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to abscisic acid stimulus, response to chitin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type, AN1-like) family protein (TAIR:AT2G41835.1); Has 518 Blast hits to 511 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 257; Fungi - 120; Plants - 80; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      10520443..10521796
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113740.6 → NP_189461.1  zinc finger (AN1-like) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189461.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q67YE6, Q9XH76
      UniProtKB/TrEMBL
      A0A178VHW6, A0A7G2ESN6
      Conserved Domains (1) summary
      pfam01428
      Location:16 → 52
      zf-AN1; AN1-like Zinc finger

    2. NM_001338949.1 → NP_001327074.1  zinc finger (AN1-like) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q67YE6, Q9XH76
      UniProtKB/TrEMBL
      A0A178VHW6, A0A7G2ESN6
      Conserved Domains (1) summary
      pfam01428
      Location:16 → 52
      zf-AN1; AN1-like Zinc finger
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q67YE6.2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools