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    transmembrane protein, putative (DUF594) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827647, updated on 18-Sep-2024

    Summary

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    Official Full Name
    transmembrane protein, putative (DUF594)
    Primary source
    TAIR:AT4G19090
    Locus tag
    AT4G19090
    See related
    Araport:AT4G19090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T18B16.5
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (10449900..10452797)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Putative membrane lipoprotein Neighboring gene hypothetical protein (DUF594) Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene PAM68-like protein (DUF3464) Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_118027.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane protein, putative (DUF594)
    NP_193644.1
    • Protein of unknown function (DUF594); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF594 (InterPro:IPR007658); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF594) (TAIR:AT5G45470.1); Has 1254 Blast hits to 833 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1252; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10449900..10452797
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118027.2 → NP_193644.1  transmembrane protein, putative (DUF594) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193644.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XUQ3, O50072
      Conserved Domains (2) summary
      pfam04578
      Location:695 → 749
      DUF594; Protein of unknown function, DUF594
      pfam13968
      Location:82 → 371
      DUF4220; Domain of unknown function (DUF4220)
    Nucleotide Protein
    Heading Accession and Version

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