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    qrich1 glutamine-rich 1 [ Danio rerio (zebrafish) ]

    Gene ID: 336260, updated on 9-Dec-2024

    Summary

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    Official Symbol
    qrich1provided by ZNC
    Official Full Name
    glutamine-rich 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-8204
    See related
    Ensembl:ENSDARG00000019797 AllianceGenome:ZFIN:ZDB-GENE-030131-8204
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fj59h09; wu:fj59h09; zgc:110077
    Summary
    Orthologous to human QRICH1 (glutamine rich 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See qrich1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (17997401..18017793, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (17862766..17883158, complement)

    Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene si:ch211-14i3.2 Neighboring gene cytokine inducible SH2-containing protein b Neighboring gene twinfilin actin-binding protein 2b Neighboring gene RNA pseudouridine synthase D4 Neighboring gene uncharacterized LOC110440097 Neighboring gene uncharacterized LOC137496689

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC110077

    General protein information

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    Preferred Names
    glutamine-rich protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001025462.1 → NP_001020633.1  glutamine-rich protein 1

      See identical proteins and their annotated locations for NP_001020633.1

      Status: PROVISIONAL

      Source sequence(s)
      BC096791
      UniProtKB/TrEMBL
      A0A8M1N6W3, Q4V9P2
      Related
      ENSDARP00000040170.4, ENSDART00000040171.7
      Conserved Domains (1) summary
      pfam12012
      Location:541 → 699
      DUF3504; Domain of unknown function (DUF3504)

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007122.7 Reference GRCz11 Primary Assembly

      Range
      17997401..18017793 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009305927.4 → XP_009304202.1  glutamine-rich protein 1 isoform X1

      See identical proteins and their annotated locations for XP_009304202.1

      UniProtKB/TrEMBL
      A0A8M1N6W3, Q4V9P2
      Conserved Domains (1) summary
      pfam12012
      Location:541 → 699
      DUF3504; Domain of unknown function (DUF3504)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394813.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      382941..405459 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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