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    evplb envoplakin b [ Danio rerio (zebrafish) ]

    Gene ID: 793139, updated on 9-Dec-2024

    Summary

    Official Symbol
    evplbprovided by ZNC
    Official Full Name
    envoplakin bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-212
    See related
    Ensembl:ENSDARG00000103459 AllianceGenome:ZFIN:ZDB-GENE-030131-212
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    evpl; wu:fb17b09
    Summary
    Predicted to act upstream of or within intermediate filament cytoskeleton organization. Predicted to be located in cytoskeleton. Is expressed in several structures, including epidermis; oral region; periderm; pharynx; and yolk syncytial layer. Orthologous to human EVPL (envoplakin). [provided by Alliance of Genome Resources, Dec 2024]
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
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    Genomic context

    See evplb in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) Unplaced Scaffold NW_003334245.1 (57264..76182, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) Unplaced Scaffold NW_003334245.1 (57249..76182, complement)

    NW_003334245.1Genomic Context describing neighboring genes Neighboring gene sphingosine kinase 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables structural molecule activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in intermediate filament cytoskeleton organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within intermediate filament cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in wound healing IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    colocalizes_with intermediate filament IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NW_003334245.1 Reference GRCz11 Primary Assembly

      Range
      57264..76182 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001922038.7XP_001922073.6  envoplakin

      UniProtKB/TrEMBL
      A0A8M1QHN7
      Related
      ENSDARP00000130701.1, ENSDART00000171412.2