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    hist2h2l histone 2, H2, like [ Danio rerio (zebrafish) ]

    Gene ID: 386920, updated on 9-Dec-2024

    Summary

    Official Symbol
    hist2h2lprovided by ZNC
    Official Full Name
    histone 2, H2, likeprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-031118-36
    See related
    Ensembl:ENSDARG00000068996 AllianceGenome:ZFIN:ZDB-GENE-031118-36
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fj05g08; zgc:73093; wu:fj05g08
    Summary
    Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Located in chromatin. Is expressed in gill; heart; muscle; pleuroperitoneal region; and proliferative region. Orthologous to several human genes including H2BC10 (H2B clustered histone 10); H2BC11 (H2B clustered histone 11); and H2BC12 (H2B clustered histone 12). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See hist2h2l in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (29815644..29816467, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (29929304..29930127, complement)

    Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene hypoxia up-regulated 1 Neighboring gene si:ch73-261i21.5 Neighboring gene H2A.X variant histone family member 1 Neighboring gene ZPR1 zinc finger

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables structural constituent of chromatin IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in chromatin IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in chromosome IEA
    Inferred from Electronic Annotation
    more info
     
    part_of nucleosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200117.1NP_956411.1  histone H2B 3

      See identical proteins and their annotated locations for NP_956411.1

      Status: PROVISIONAL

      Source sequence(s)
      BC059463
      UniProtKB/Swiss-Prot
      Q6PC60
      Related
      ENSDARP00000055912.4, ENSDART00000055913.6
      Conserved Domains (1) summary
      smart00427
      Location:28124
      H2B; Histone H2B

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007121.7 Reference GRCz11 Primary Assembly

      Range
      29815644..29816467 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394791.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      20090..20913 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)