cldna claudin a [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: cldnaprovided by ZNC
Official Full Name: claudin aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-010328-1
See related: Ensembl:ENSDARG00000069888 AllianceGenome:ZFIN:ZDB-GENE-010328-1
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: cldn30a; fb99d09; wu:fb99d09
Summary: This gene encodes a member of the claudin family. As the major transmembrane proteins of tight junctions, claudins mediate cellular adhesion and migration. Claudins are also thought to play a role in morphogenesis. [provided by RefSeq, Jul 2008]
Orthologs: all
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Genomic context

Location:: chromosome: 15

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	15	NC_007126.7 (2655658..2657508, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	15	NC_007126.6 (2692086..2693936, complement)

Chromosome 15 - NC_007126.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables structural molecule activity	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in anchoring junction	IEA Inferred from Electronic Annotation more info
located_in bicellular tight junction	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: claudin a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_131762.2 → NP_571837.2 claudin a

Status: REVIEWED

Source sequence(s)

AF359423

UniProtKB/TrEMBL

A0A8M1P6R7, Q90XS1

Related

ENSDARP00000092862.3, ENSDART00000102086.5

Conserved Domains (1) summary

cl21598
Location:5 → 181

PMP22_Claudin; PMP-22/EMP/MP20/Claudin family