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    • Showing Current items.

    si:ch211-114c12.2 si:ch211-114c12.2 [ Danio rerio (zebrafish) ]

    Gene ID: 336578, updated on 17-Sep-2024

    Summary

    Official Symbol
    si:ch211-114c12.2provided by ZNC
    Official Full Name
    si:ch211-114c12.2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-8522
    See related
    Ensembl:ENSDARG00000028542 AllianceGenome:ZFIN:ZDB-GENE-030131-8522
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fb14b05; wu:fb14b05
    Orthologs
    NEW
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    Genomic context

    See si:ch211-114c12.2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (24128908..24135563)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (23625081..23631763)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene si:ch211-114c12.5 Neighboring gene capping protein (actin filament), gelsolin-like a Neighboring gene mitochondrial ribosomal protein S31 Neighboring gene solute carrier family 25 member 15b

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    uncharacterized protein LOC336578
    Names
    un-named hi37
    unm hi37

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002300.1NP_001002300.1  uncharacterized protein LOC336578

      See identical proteins and their annotated locations for NP_001002300.1

      Status: PREDICTED

      Source sequence(s)
      AY648708
      UniProtKB/TrEMBL
      A0A8M1N053, Q6DRQ1
      Related
      ENSDARP00000032320.4, ENSDART00000029719.6
      Conserved Domains (1) summary
      cl28271
      Location:127275
      dnaA; chromosomal replication initiation protein; Provisional

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      24128908..24135563
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394575.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      135193..141851
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)