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    nol12 nucleolar protein 12 [ Danio rerio (zebrafish) ]

    Gene ID: 393260, updated on 4-Jan-2025

    Summary

    Official Symbol
    nol12provided by ZNC
    Official Full Name
    nucleolar protein 12provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1035
    See related
    Ensembl:ENSDARG00000038027 AllianceGenome:ZFIN:ZDB-GENE-040426-1035
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:56457
    Summary
    Predicted to enable rRNA binding activity. Predicted to be located in nucleus. Predicted to be active in nucleolus. Orthologous to human NOL12 (nucleolar protein 12). [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
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    Genomic context

    See nol12 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (1150376..1156033)
    105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (1381727..1387384)

    Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene sterol regulatory element binding transcription factor 2 Neighboring gene uncharacterized LOC100005990 Neighboring gene serine/arginine repetitive matrix protein 5 Neighboring gene TRIO and F-actin binding protein b

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Clone Names

    • MGC56457

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables molecular_function ND
    No biological Data available
    more info
     
    enables rRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables rRNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200290.1NP_956584.1  nucleolar protein 12

      See identical proteins and their annotated locations for NP_956584.1

      Status: PROVISIONAL

      Source sequence(s)
      BC049449
      UniProtKB/Swiss-Prot
      Q7ZWE7
      Related
      ENSDARP00000123934.1, ENSDART00000148524.3
      Conserved Domains (1) summary
      pfam09805
      Location:28100
      Nop25; Nucleolar protein 12 (25kDa)

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007114.7 Reference GRCz11 Primary Assembly

      Range
      1150376..1156033
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)