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    ice1 KIAA0947-like (H. sapiens) [ Danio rerio (zebrafish) ]

    Gene ID: 327355, updated on 9-Dec-2024

    Summary

    Official Symbol
    ice1provided by ZNC
    Official Full Name
    KIAA0947-like (H. sapiens)provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-5566
    See related
    Ensembl:ENSDARG00000058461 AllianceGenome:ZFIN:ZDB-GENE-030131-5566
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fi04d03; kiaa0947l; wu:fi04d03
    Summary
    Is expressed in head. Orthologous to human ICE1 (interactor of little elongation complex ELL subunit 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See ice1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (9400661..9420347)
    105 previous assembly GRCz10 (GCF_000002035.5) 16 NC_007127.6 (9509759..9529445)

    Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene dynein, axonemal, heavy chain 5 Neighboring gene adenylate cyclase 2a Neighboring gene chemokine (C-C motif) receptor 8.1 Neighboring gene PRP3 pre-mRNA processing factor 3 homolog (yeast)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    little elongation complex subunit 1
    Names
    interactor of little elongator complex ELL subunit 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001034965.3NP_001030137.2  little elongation complex subunit 1

      Status: VALIDATED

      Source sequence(s)
      BX324207
      UniProtKB/TrEMBL
      Q3HSD3
      Related
      ENSDARP00000122110.1, ENSDART00000146174.3
      Conserved Domains (2) summary
      COG1196
      Location:52301
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02463
      Location:28815
      SMC_N; RecF/RecN/SMC N terminal domain

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007127.7 Reference GRCz11 Primary Assembly

      Range
      9400661..9420347
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394953.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      48831..68523
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)